- On this website JSI medical systems provides pre-definied settings for an easy import in our SEQUENCE PILOT module SEQNEXT.
- The files contain thresholds for variant calling, coverage warning and quality.
- These settings are only a proposal.
- The settings might to be adapted depending on your data and needs.
- The files can be imported only into SEQUENCE PILOT versions 4.4 and higher.
Settings with genome mapping (the raw data are mapped against the complete genome to filter background):
Settings without genome mapping: